The ResearchSchool/CC1837_Y08S web of TWiki. TWiki is a Web-Based Collaboration Platform for the Enterprise. http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S Copyright 2012 by contributing authors 2012-04-16T12:36:05Z http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/WebHome 2012-04-16T12:36:05Z

The course provides essential, practical knowledge about computational and bioinformatics methods in biology with focus on developmental biology. The integration of ... (last changed by MattiNikkola)

MattiNikkola http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/GroupFour 2009-07-13T12:00:53Z

Group four Bioinformatics analysis of mixed lineage leukemia (MLL) Masako Harada, Department of Oncology and Pathology, CCK, KI Goncalo Castelo Branco, Department ... (last changed by MartinDahlo)

MartinDahlo http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/Practicals 2009-07-13T12:00:53Z

The course practicals cover following topics: Database searching, Genome browsers (Ensembl and UCSC) Sequence analysis tools (nucleic acid and protein sequence analysis ... (last changed by MartinDahlo)

MartinDahlo http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/Schedule 2009-07-13T12:00:53Z

Day 1: 12 May 2008 09.00 09.45 (Room D224 at CMB, von Eulers v 3) Lecture: Introduction to the course, practical issues #8211; Matti Nikkola 09.45 10.15 Coffee ... (last changed by MartinDahlo)

MartinDahlo http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/Splicing 2009-07-13T12:00:53Z

Splicing Practical In your quest to understand gene regulation instem cells you sequenced a cDNA library from mouse ES cells and found anapparent splice variant of ... (last changed by MartinDahlo)

MartinDahlo http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/GroupOne 2009-07-13T12:00:53Z

This is the page for Group Smc1 (Christine, Charlotte and Giulia) Introduction SMC proteins represent a large family of ATPases that participate in many aspects ... (last changed by MartinDahlo)

MartinDahlo http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/WebStatistics 2009-07-01T13:56:35Z

Statistics for nop ResearchSchool/CC1837 Y08S Web Month: Topic views: Topic saves: File uploads: Most popular topic views: Top contributors ... (last changed by TWikiAdminGroup)

TWikiAdminGroup http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/Resources 2009-04-27T13:34:32Z

This page contains links to important bioinformatics resources on the internet. Genomes and Gene Annotations: USCS Genome Browser Ensembl Genome Browser NCBI Genome ... (last changed by RickardSandberg)

RickardSandberg http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/YunPing 2009-03-16T15:03:22Z

Yun Ping Lim has worked on the following projects: B. T. K. Lee, L. Liew, J. Lim, J.K.L. Tan, T.C. Lee, P.S. Veladandi, Y.P. Lim , H. Han, G. Rajagopal, N. L. Anderson ... (last changed by LimYunPing)

LimYunPing http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/Venue 2008-07-03T07:12:51Z

(last changed by MartinDahlo)

MartinDahlo http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/Examination 2008-07-03T07:12:50Z

Information about examination The exam takes places on Tuesday, May 20 in the seminar room D224 at CMB. The exam consists of project presentations by the course students ... (last changed by MartinDahlo)

MartinDahlo http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/GroupThree 2008-07-01T13:14:38Z

Group three Notch 1 (Heather, Sana, Sebastian) Introduction Notch signalling is a very important signalling pathway in both development and disease. First identified ... (last changed by MartinDahlo)

MartinDahlo http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/TheGene 2008-05-19T19:23:08Z

The Cux2 gene Human Cux2 is located on the strand of chromosome 12. There are two alternative splicing variants of Cux2, using different first exons. The Refseq transcript ... (last changed by MarinaFranck)

MarinaFranck http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/NewPage 2008-05-19T19:05:46Z

We used UCSC Genome B rowser to identify conserved regions and transcription factor binding sites within these. The most well conserved region is the one surrounding ... (last changed by MarinaFranck)

MarinaFranck http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/GcBExpression 2008-05-19T16:52:01Z

GoncaloCasteloBranco 17 May 2008 Gene expression In order to determine the general expression pattern of MLL in different human cell and tissues. we perform a query ... (last changed by GoncaloCasteloBranco)

GoncaloCasteloBranco http://www.dbrm.se/twiki5/bin/view/ResearchSchool/CC1837_Y08S/GcbCisregulatoryregions 2008-05-19T16:41:31Z

GoncaloCasteloBranco 17 May 2008 Cis regulatory regions of MLL Conservation In order to identify cis regulatory regions of the MLL genes, we first analyzed in the ... (last changed by GoncaloCasteloBranco)

GoncaloCasteloBranco