Nonsense-mediated Decay Practical
Check the following two splice variants for tumor necrosis factor receptor 25 by mapping them to the genomic locus. Get the protein translations and the positions of the the exon-exon junctions, and use this data to decide which one of the variants you would expect to identify in a proteomics database?
>variantA TNFR25 (nm_148965)
cgggccctgcgggcgcggggctgaaggcggaaccacgacgggcagagagc acggagccgggaagcccctgggcgcccgtcggagggctatggagcagcgg ccgcggggctgcgcggcggtggcggcggcgctcctcctggtgctgctggg ggcccgggcccagggcggcactcgtagccccaggtgtgactgtgccggtg acttccacaagaagattggtctgttttgttgcagaggctgcccagcgggg cactacctgaaggccccttgcacggagccctgcggcaactccacctgcct tgtgtgtccccaagacaccttcttggcctgggagaaccaccataattctg aatgtgcccgctgccaggcctgtgatgagcaggcctcccaggtggcgctg gagaactgttcagcagtggccgacacccgctgtggctgtaagccaggctg gtttgtggagtgccaggtcagccaatgtgtcagcagttcacccttctact gccaaccatgcctagactgcggggccctgcaccgccacacacggctactc tgttcccgcagagatactgactgtgggacctgcctgcctggcttctatga acatggcgatggctgcgtgtcctgccccacgccacccccgtcccttgcag gagcaccctggggagctgtccagagcgctgtgccgctgtctgtggctgga ggcagagtaggtgtgttctgggtccaggtgctcctggctggccttgtggt ccccctcctgcttggggccaccctgacctacacataccgccactgctggc ctcacaagcccctggttactgcagatgaagctgggatggaggctctgacc ccaccaccggccacccatctgtcacccttggacagcgcccacacccttct agcacctcctgacagcagtgagaagatctgcaccgtccagttggtgggta acagctggacccctggctaccccgagacccaggaggcgctctgcccgcag gtgacatggtcctgggaccagttgcccagcagagctcttggccccgctgc tgcgcccacactctcgccagagtccccagccggctcgccagccatgatgc tgcagccgggcccgcagctctacgacgtgatggacgcggtcccagcgcgg cgctggaaggagttcgtgcgcacgctggggctgcgcgaggcagagatcga agccgtggaggtggagatcggccgcttccgagaccagcagtacgagatgc tcaagcgctggcgccagcagcagcccgcgggcctcggagccgtttacgcg gccctggagcgcatggggctggacggctgcgtggaagacttgcgcagccg cctgcagcgcggcccgtgacacggcgcccacttgccacctaggcgctctg gtggcccttgcagaagccctaagtacggttacttatgcgtgtagacattt tatgtcacttattaagccgctggcacggccctgcgtagcagcaccagccg gccccacccctgctcgcccctatcgctccagccaaggcgaagaagcacga acgaatgtcgagagggggtgaagacatttctcaacttctcggccggagtt tggctgagatcgcggtattaaatctgtgaaagaaaacaaaacaaaacaaa aaaaaaaaaaaaaaa >variantB TNFR25 (nm_148968)
cgggccctgcgggcgcggggctgaaggcggaaccacgacgggcagagagc acggagccgggaagcccctgggcgcccgtcggagggctatggagcagcgg ccgcggggctgcgcggcggtggcggcggcgctcctcctggtgctgctggg ggcccgggcccagggcggcactcgtagccccaggtgtgactgtgccggtg acttccacaagaagattggtctgttttgttgcagaggctgcccagcgggg cactacctgaaggccccttgcacggagccctgcggcaactccacctgcct tgtgtgtccccaagacaccttcttggcctgggagaaccaccataattctg aatgtgcccgctgccaggcctgtgatgagcaggcctcccaggtggcgctg gagaactgttcagcagtggccgacacccgctgtggctgtaagccaggctg gtttgtggagtgccaggtcagccaatgtgtcagcagttcacccttctact gccaaccatgcctagactgcggggccctgcaccgccacacacggctactc tgttcccgcagagatactgactgtgggacctgcctgcctggcttctatga acatggcgatggctgcgtgtcctgccccacgccacccccgtcccttgcag gagcaccctggggagctgtccagagcgctgtgccgctgtctgtggctgga ggcagagtaggtggtgtgctgggaatgcgcgtgggagaactgggatggac cgaggggaggcgggtgaggaggggggcaaccacccaacacccaccagctg ctttcagtgttctgggtccaggtgctcctggctggccttgtggtccccct cctgcttggggccaccctgacctacacataccgccactgctggcctcaca agcccctggttactgcagatgaagctgggatggaggctctgaccccacca ccggccacccatctgtcacccttggacagcgcccacacccttctagcacc tcctgacagcagtgagaagatctgcaccgtccagttggtgggtaacagct ggacccctggctaccccgagacccaggaggcgctctgcccgcaggtgaca tggtcctgggaccagttgcccagcagagctcttggccccgctgctgcgcc cacactctcgccagagtccccagccggctcgccagccatgatgctgcagc cgggcccgcagctctacgacgtgatggacgcggtcccagcgcggcgctgg aaggagttcgtgcgcacgctggggctgcgcgaggcagagatcgaagccgt ggaggtggagatcggccgcttccgagaccagcagtacgagatgctcaagc gctggcgccagcagcagcccgcgggcctcggagccgtttacgcggccctg gagcgcatggggctggacggctgcgtggaagacttgcgcagccgcctgca gcgcggcccgtgacacggcgcccacttgccacctaggcgctctggtggcc cttgcagaagccctaagtacggttacttatgcgtgtagacattttatgtc acttattaagccgctggcacggccctgcgtagcagcaccagccggcccca cccctgctcgcccctatcgctccagccaaggcgaagaagcacgaacgaat gtcgagagggggtgaagacatttctcaacttctcggccggagtttggctg agatcgcggtattaaatctgtgaaagaaaacaaaacaaaacaaaaaaaaa aaaaaaaaa >genomic_TNFR25
TTGCGCTTTGCCGGACTGGATGGAGTGGAGGAGGCCCAGGCCACAGTACC ACCCCACCTGCCCAGGCAGCCCCTCGTCACCTACTCCCCGAAGTTACCAG CTCAGCTCGAGTCTTCAGGGCTGGGCTCCTAGGCTGCCCATCCTACTTCT ACCCTCACTGGCCTCCAGTGGGATTCACTCCTGCCCTGCCCCCACCTTCC CAGTCCCACAGGCCACCCCTGGCTTGGGCTGGGTTCTGTGAAGTTACGTA TTTATTGAGCTTTTGGTTCTTTTATAAAGACTTGTCTAGACTCCACTGGG AAGAGTCCTTTGCTTTGGGGCCCAGTGACTCGGGGCACTTGAGTTCAGGG CGGCCTCCTTGTGTTCCTGTGCTCCTCCACTTGCCACGGATGGGCCACGG ATGGAGCTTGCCATGGGAAGCACTGGGAAGTAATGGGGTGTGGGGTGCCA CCAGACCAACACCCCCAGACTTCCCCACCTTCAGCCACCATCAGAGCCTC TCCCCAGGTGCCCCCCGGGGATTCAGGGCTGAATCTGCCCAGTTCCCACA CTCAGGCCAGCCCTCTTGGGAAGGTGGGTCCTCCATGGGGGTCCCTTCAG GAACTTTTTTTTTTTTTTTAATACAGAGTCTCACTCTGTCACCTAGGTTG GAGTGCAGTGGTGTGATGTCGGCTCACTGCAACCTCTGCCTCCCGGGTTC AAACGATTCTCCTGCCCCAGCCACTCTAGTAGCTGGAACTGCAGGTGTGC ACCACCACGCCGGGCTAGTTTTTGTATTTTAAGTAGAGACGGCATTTCAC CATATTGGTCAGGCTGGTCTCGAACTCCTGACCCCAAGTGTTCCGCCCGC CTCTGCCTCCCATAGTGCTAGAATTACAGGCCTGAGCTACTGCGCTTGGC CCCTTGCGGTACTTTTGGCCCAACCTCCTCCATGGCTGGGGACGCGGAGG CCGAGAGAGAAGTCACTTGCCCTGGCTCTACCTTGAAGTGGTTCTCAGGG TTGGGGCGAGAGTCGGGGTGGGGACCGAGATGCAGCTCTATCCTGTGCCC CTGGTCGCAGCAGGCAGCCCAGCGCTTCGCGTGTTCTACTTGGCCTGTCC GCTGCCGCCTAATGAGCTCAGGTCTAGGCCGAGCAGAGGGGGCACCTGGT CGGACTCGGTTGGGCTCGGGCGGCCCCGCCTCCCCCCGCCCGCCAGGCGG GCCCTTCTCGACGGCGCGGGGCGGGCCCTGCGGGCGCGGGGCTGAAGGCG GAACCACGACGGGCAGAGAGCACGGAGCCGGGAAGCCCCTGGGCGCCCGT CGGAGGGCTATGGAGCAGCGGCCGCGGGGCTGCGCGGCGGTGGCGGCGGT GAGTTGAGACGCAGGAGGCTAGGGGCAGCTTTGAGCCCTGTCCCAAGAGC CTCGGTGAAGGAAGGGGCCCCGGGCGCGTCTCCACTCCAAGCCTCACTGG GGGCTGGGTTGGCCGCCCTTTCCGATCTCGTTAAAGGCTCCTCCAGGGCG TAGCCCTTCCACTGAGAGGAAACCCCTCCCAGGAGGGTCTGGGGGCCCCA GGCAGAGCATTATCAGTGTCCCTCCCCCAACAGAAAGCATGGGTGGGGGT GGGGGCGCTGCTGGATTCCTGCTCTGGTGGAGGGGAAACTTGTGAGGGGC TGGTAAGCGCCCCCTCCGAAGCCTGGTGTGTGCGCGGGGGGAAGGAAGTT AGTTTCCTCTCCACCCATGGGCACCCCTTCTGCCCGGGGCCTGGGAAGTG GGCTGCTCTGTGGGCAAATGCTGGGGCCTCTGAAATGGAGGAGACGCAGC AGGGAGAGGCCCCACGTGGGCAGCTGCGCTGAGAGTCAGCAGCACCTGTC CCCCAGGCGCTCCTCCTGGTGCTGCTGGGGGCCCGGGCCCAGGGCGGCAC TCGTAGCCCCAGGTGTGACTGTGCCGGTGACTTCCACAAGAAGATTGGTC TGTTTTGTTGCAGAGGCTGCCCAGCGGGTAAGTGGCCACAGGGGTGGGAG AGGCATGGGGCAGGCAGGGCTGGAGAGGTGGCGGGCAGGCCCGGGAGGTA AGAGGAGGCTGGCAGGGGAGGTAGGGGTAGGCTGACAGAGAAGTAGGGAG CTGGAGAGAAAGAGGGAGGGAGGGCAGGGTGGGAAGCAGGTCGGGGGTTG CTGGGCAGCCCCTCTGCCTGCCTGACCCCTGCCTGGTTCCACAGGGCACT ACCTGAAGGCCCCTTGCACGGAGCCCTGCGGCAACTCCACCTGCCTTGTG TGTCCCCAAGACACCTTCTTGGCCTGGGAGAACCACCATAATTCTGAATG TGCCCGCTGCCAGGCCTGTGATGAGCAGGGTGAGGGGCTTCTCAGTGCTT GGCAGGGAGTTCCTAAGGACAGGCCTTTCTGAAGGAAGTGGCTGGCTCGG GCCCAAACTTGGGGTGTGAGGGTCCTGCACCCACCCTTGCCAGAACCCTC CACCCTGATCCTCCTTCAGGGTGCCCTTGCCCCTTCTCTCTTCCTGGTGA CCTTCCCATCTCTCCATGTGCCTTGGCCTCTGGTCGGCCTTAATCTCTGA GCTTCTCTCTTTTTTAGGGTAGCCCTGTACCTGTCTGTCTTTCGCCTATT TCTGTCTCCATTATCTTGGGATAATGCCTCTGCCTCTCCATGGGAGCCTT TGGCCCTGACTAACTCTCCACTCCCCATCTCCCTGCACCCCCACCAGCCT CCCAGGTGGCGCTGGAGAACTGTTCAGCAGTGGCCGACACCCGCTGTGGC TGTAAGCCAGGCTGGTTTGTGGAGTGCCAGGTCAGCCAATGTGTCAGCAG TTCACCCTTCTACTGCCAACCATGCCTAGACTGCGGGGCCCTGCACCGCC ACACACGGCTACTCTGTGAGTACCCCCACCCAGGGCTCTCTACTCCCAGA CCCCCTTCTCCCTGCCTGACCCACTCCTGTCCCATGGTGACGCATGCCTC TCCTGGATTGCAGGTTCCCGCAGAGATACTGACTGTGGGACCTGCCTGCC TGGCTTCTATGAACATGGCGATGGCTGCGTGTCCTGCCCCACGTAATTCC TAGCTGTCGTGGGATGGAGGGAAGGGCGGCTGGGAGCAGAGCAGGGGCCT GGGGTGGGGCAGGTGCTGCTGGTTCAGGAATAGGAAGAGGGGATAGGGAG GAGGGAGCCTTGGCCCTGTGATGGGTGGGCCCCACTTCAGGCAAACTTAG ATGGCAAAAGAGCAATCTGGATCCGCCTTAGCCAGATACATAAGGGTATT TGCCTTCACTTTCAGCCAGCATTCCCCCCAGCGATCCTAGCCAGATATTA CAGATGATTTGTCACTTACACAGAGAGTCACATTGATATAGCTTTAAAAC TTGGGCTGAAGGAGGTTGAGGCTGCAGTGAGCTATGATCGTGCCACTGCA CTTCAGCCTGGGCAACAGAGCGAGACCTATTAAATAAATAAATAAATATT AAATCTATTAAATATTAAATATTAAATCTATTAAATAAATAAATACAAAG GGCTGAGAGTCAGGACTGTGCTGCTAGTTCTCTAGGGGATCTTGGGCAAG TGCAGAGAATTCGCGTCTCTGATGTGTGGTGTCCCTTTCTCAACATGGGA TGTTAGCAGCTAATTCACAGGCCTTTGATCAGAGGTAAGGGACTTTCTGT AGCTATTCAAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAG ACTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACT ACAACCTCTGCTGCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAA GTAGCTGGGACTACAGGAGCCCACCACCACCCCCGGCTAATTTTTTGTAT TTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTTGATCAC CTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAG GCATGAGCCACCGCGCCCGGCCTCCATTCAAGTCTTTATTGAATATCTGC TATGTTCTACACACTGTTCTAGGTGCTGGGGATGCAACAGGGGACAAAAT AGGCAAAATCCCTGTCCTTTTGGGGTTGACATTCTAGTGACTCTTCATGT AGTCTAGAAGAAGCTCAGTGAATAGTGTCTGTGGTTGTTACCAGGGACAC AATGACAGGAACATTCTTGGGTAGAGTGAGAGGCCTGGGGAGGGAAGGGT CTCTAGGATGGAGCAGATGCTGGGCAGTCTTAGGGAGCCCCTCCTGGCAT GCACCCCCTCATCCCTCAGGCCACCCCCGTCCCTTGCAGGAGCACCCTGG GGAGCTGTCCAGAGCGCTGTGCCGCTGTCTGTGGCTGGAGGCAGAGTAGG TGGTGTGCTGGGAATGCGAGTGGGAGAACTGGGATGGACCGAGGGGAGGC GGGTGAGGAGGGGGGCAACCACCCAACACCCACCAGCTGCTTTCAGTGTT CTGGGTCCAGGTGCTCCTGGCTGGCCTTGTGGTCCCCCTCCTGCTTGGGG CCACCCTGACCTACACATACCGCCACTGCTGGCCTCACAAGCCCCTGGTT ACTGGTAAGTACACACACCCACACACGCACCCAGAAGCCTGGGGTCAGGA TGGGTAGCCCAGAGTCTACTCAACCCTGATACAGAAGGGGAAACTGAGGC AGGGAGTGTGGGGTGCAGAGGAACCCTAGAGGAGCTGTACCAGCACCCAG GTCCAGGAGGCTTGCCTGGTGGCTGACCGCAATCTCTCTGTGTCTGTCAG CAGATGAAGCTGGGATGGAGGCTCTGACCCCACCACCGGTAAGAACCTCA CTGTGTGATTCTGGGCTGCCTTCTGGAGCTGGAAGATCAAGCCTTACTAT GATCCCTGGAGCTTGGCACGCGGCCAGCACCGGGTAGCCCTAGTGGACAG AGGTGTTGGGAGCAGAGTCATCAGTGGATGAGACCAGCACAGTGCCTGCC CTCAAGGGGTGCTCAGTCAGCTGGAGTTCAGATTCGTACACAGGAGCTAA CAGTTCAATGGAAGGAGAGCCCCATGGTGCTGGGGGACAAGAGGAAGGAG GCGGGGGCAGGGGACTCAAGGCAGAAGCAAGAGTTCTGCTGGGCTACAGT GAGAGCAGGGCCAACTGTGGGAGGTGTCATTGCGGGGGTGTCTGCTGACT GAACCAGGGACTGTCCCCTCCTGGAGAGGCACTGCGGGTAAGGGGCCTTA CTTGGCAAGCAGGGCTGACCTGGGGCCCCTCTTGGCTTCCAGGCCACCCA TCTGTCACCCTTGGACAGCGCCCACACCCTTCTAGCACCTCCTGACAGCA GTGAGAAGATCTGCACCGTCCAGTTGGTGGGTAACAGCTGGACCCCTGGC TACCCCGAGACCCAGGAGGCGCTCTGCCCGCAGGTGACATGGTCCTGGGA CCAGTTGCCCAGCAGAGCTCTTGGTAAGGGACATCAGTGGCCTGAGGCCT TGACCCCATTCTCCTGTCTGCGGTGGGAAGTTGTGGTTTCACAACGTGTT CCCTTTCTGCCCCCTAACTGACGGAGTCCGCCCTATGCCCTGACCCACCG GATCCAGCGGGCTTCAGCCCTGGGGTACCCGCACGAACGCCCCTGACTCT GCCTCCCGACCGCGGCCCACGTACCCCAATTGGCTCTCTCTGGCCCTGCC CCAGGCCCCGCTGCTGCGCCCACACTCTCGCCAGAGTCCCCAGCCGGCTC GCCAGCCATGATGCTGCAGCCGGGCCCGCAGCTCTACGACGTGATGGACG CGGTCCCAGCGCGGCGCTGGAAGGAGTTCGTGCGCACGCTGGGGCTGCGC GAGGCAGAGATCGAAGCCGTGGAGGTGGAGATCGGCCGCTTCCGAGACCA GCAGTACGAGATGCTCAAGCGCTGGCGCCAGCAGCAGCCCGCGGGCCTCG GAGCCGTTTACGCGGCCCTGGAGCGCATGGGGCTGGACGGCTGCGTGGAA GACTTGCGCAGCCGCCTGCAGCGCGGCCCGTGACACGGCGCCCACTTGCC ACCTAGGCGCTCTGGTGGCCCTTGCAGAAGCCCTAAGTACGGTTACTTAT GCGTGTAGACATTTTATGTCACTTATTAAGCCGCTGGCACGGCCCTGCGT AGCAGCACCAGCCGGCCCCACCCCTGCTCGCCCCTATCGCTCCAGCCAAG GCGAAGAAGCACGAACGAATGTCGAGAGGGGGTGAAGACATTTCTCAACT TCTCGGCCGGAGTTTGGCTGAGATCGCGGTATTAAATCTGTGAAAGAAAA CAAAACAAAACAAAAACGGCTTCTTGGCGTTTCTGCGGGGCTGGGGTGTT AAGTGGACTGGACTTTTCTCGAGGGATTCGAAGGGGACGGGAATCTTGTC ACCCCGGGATCTGGCACCCATGGTGGAGTCCAGTGTGGCCTTAGCTCCCA AGCCTGCCCCTCCCGAGTCCACTCTGGCTCAATTACCCCGAGAAGGAGAG AGCAAGTCGCGGCCACAGCGAGTGAGTGAACCGGAGCCCAGATGAGAGCG CTTTAATGGGGCTGCGAGGTGGCGGAGACAGGGTCGGGATGGGGTGCAGC AGTTGGAGACACAGGGTCAGGGCCCCTCATCCTCTATTCACTCCACCGGG GCAGTGAAAGGGTCCCGGCAGCGAGTGGGTCTGGCTGGGGACGGGGCGCA GACTTGAGGGAGGTGGGGCCAGAGGTGGGGTCCCGGGGGCCACAAGTGCG GCCCGGCCAGACAGGCAGTTTTCATGTTTCTGGTAAACAAATGACTGAGA GGAAACCCTTGGCGGGGATAAGAAATGAGGCCCGGGCTAGGCCGCGCGCA GATCTGGGTCAGAGAGGAAGGGAAAACCCCTTCCCCGAGCTCGGGGCCTG CCTCCACCCAGGATGCGCCAGCGACGCCGGTTCCGGGGTGCGGGGGAGGG GGCTGCATCCTGGAGGGGGCTGAGCCCCGCAGGAAAACAAAGTCACCACC CACGGGGCTGGGGAGAGCTCTGCACTCTTTGATAGTCAACGAACATGCAA ATATATGTAAGTCGGCATGCAAATAAGCAGCATTTGTTG -- RickardSandberg - 14 May 2008
cgggccctgcgggcgcggggctgaaggcggaaccacgacgggcagagagc acggagccgggaagcccctgggcgcccgtcggagggctatggagcagcgg ccgcggggctgcgcggcggtggcggcggcgctcctcctggtgctgctggg ggcccgggcccagggcggcactcgtagccccaggtgtgactgtgccggtg acttccacaagaagattggtctgttttgttgcagaggctgcccagcgggg cactacctgaaggccccttgcacggagccctgcggcaactccacctgcct tgtgtgtccccaagacaccttcttggcctgggagaaccaccataattctg aatgtgcccgctgccaggcctgtgatgagcaggcctcccaggtggcgctg gagaactgttcagcagtggccgacacccgctgtggctgtaagccaggctg gtttgtggagtgccaggtcagccaatgtgtcagcagttcacccttctact gccaaccatgcctagactgcggggccctgcaccgccacacacggctactc tgttcccgcagagatactgactgtgggacctgcctgcctggcttctatga acatggcgatggctgcgtgtcctgccccacgccacccccgtcccttgcag gagcaccctggggagctgtccagagcgctgtgccgctgtctgtggctgga ggcagagtaggtgtgttctgggtccaggtgctcctggctggccttgtggt ccccctcctgcttggggccaccctgacctacacataccgccactgctggc ctcacaagcccctggttactgcagatgaagctgggatggaggctctgacc ccaccaccggccacccatctgtcacccttggacagcgcccacacccttct agcacctcctgacagcagtgagaagatctgcaccgtccagttggtgggta acagctggacccctggctaccccgagacccaggaggcgctctgcccgcag gtgacatggtcctgggaccagttgcccagcagagctcttggccccgctgc tgcgcccacactctcgccagagtccccagccggctcgccagccatgatgc tgcagccgggcccgcagctctacgacgtgatggacgcggtcccagcgcgg cgctggaaggagttcgtgcgcacgctggggctgcgcgaggcagagatcga agccgtggaggtggagatcggccgcttccgagaccagcagtacgagatgc tcaagcgctggcgccagcagcagcccgcgggcctcggagccgtttacgcg gccctggagcgcatggggctggacggctgcgtggaagacttgcgcagccg cctgcagcgcggcccgtgacacggcgcccacttgccacctaggcgctctg gtggcccttgcagaagccctaagtacggttacttatgcgtgtagacattt tatgtcacttattaagccgctggcacggccctgcgtagcagcaccagccg gccccacccctgctcgcccctatcgctccagccaaggcgaagaagcacga acgaatgtcgagagggggtgaagacatttctcaacttctcggccggagtt tggctgagatcgcggtattaaatctgtgaaagaaaacaaaacaaaacaaa aaaaaaaaaaaaaaa >variantB TNFR25 (nm_148968)
cgggccctgcgggcgcggggctgaaggcggaaccacgacgggcagagagc acggagccgggaagcccctgggcgcccgtcggagggctatggagcagcgg ccgcggggctgcgcggcggtggcggcggcgctcctcctggtgctgctggg ggcccgggcccagggcggcactcgtagccccaggtgtgactgtgccggtg acttccacaagaagattggtctgttttgttgcagaggctgcccagcgggg cactacctgaaggccccttgcacggagccctgcggcaactccacctgcct tgtgtgtccccaagacaccttcttggcctgggagaaccaccataattctg aatgtgcccgctgccaggcctgtgatgagcaggcctcccaggtggcgctg gagaactgttcagcagtggccgacacccgctgtggctgtaagccaggctg gtttgtggagtgccaggtcagccaatgtgtcagcagttcacccttctact gccaaccatgcctagactgcggggccctgcaccgccacacacggctactc tgttcccgcagagatactgactgtgggacctgcctgcctggcttctatga acatggcgatggctgcgtgtcctgccccacgccacccccgtcccttgcag gagcaccctggggagctgtccagagcgctgtgccgctgtctgtggctgga ggcagagtaggtggtgtgctgggaatgcgcgtgggagaactgggatggac cgaggggaggcgggtgaggaggggggcaaccacccaacacccaccagctg ctttcagtgttctgggtccaggtgctcctggctggccttgtggtccccct cctgcttggggccaccctgacctacacataccgccactgctggcctcaca agcccctggttactgcagatgaagctgggatggaggctctgaccccacca ccggccacccatctgtcacccttggacagcgcccacacccttctagcacc tcctgacagcagtgagaagatctgcaccgtccagttggtgggtaacagct ggacccctggctaccccgagacccaggaggcgctctgcccgcaggtgaca tggtcctgggaccagttgcccagcagagctcttggccccgctgctgcgcc cacactctcgccagagtccccagccggctcgccagccatgatgctgcagc cgggcccgcagctctacgacgtgatggacgcggtcccagcgcggcgctgg aaggagttcgtgcgcacgctggggctgcgcgaggcagagatcgaagccgt ggaggtggagatcggccgcttccgagaccagcagtacgagatgctcaagc gctggcgccagcagcagcccgcgggcctcggagccgtttacgcggccctg gagcgcatggggctggacggctgcgtggaagacttgcgcagccgcctgca gcgcggcccgtgacacggcgcccacttgccacctaggcgctctggtggcc cttgcagaagccctaagtacggttacttatgcgtgtagacattttatgtc acttattaagccgctggcacggccctgcgtagcagcaccagccggcccca cccctgctcgcccctatcgctccagccaaggcgaagaagcacgaacgaat gtcgagagggggtgaagacatttctcaacttctcggccggagtttggctg agatcgcggtattaaatctgtgaaagaaaacaaaacaaaacaaaaaaaaa aaaaaaaaa >genomic_TNFR25
TTGCGCTTTGCCGGACTGGATGGAGTGGAGGAGGCCCAGGCCACAGTACC ACCCCACCTGCCCAGGCAGCCCCTCGTCACCTACTCCCCGAAGTTACCAG CTCAGCTCGAGTCTTCAGGGCTGGGCTCCTAGGCTGCCCATCCTACTTCT ACCCTCACTGGCCTCCAGTGGGATTCACTCCTGCCCTGCCCCCACCTTCC CAGTCCCACAGGCCACCCCTGGCTTGGGCTGGGTTCTGTGAAGTTACGTA TTTATTGAGCTTTTGGTTCTTTTATAAAGACTTGTCTAGACTCCACTGGG AAGAGTCCTTTGCTTTGGGGCCCAGTGACTCGGGGCACTTGAGTTCAGGG CGGCCTCCTTGTGTTCCTGTGCTCCTCCACTTGCCACGGATGGGCCACGG ATGGAGCTTGCCATGGGAAGCACTGGGAAGTAATGGGGTGTGGGGTGCCA CCAGACCAACACCCCCAGACTTCCCCACCTTCAGCCACCATCAGAGCCTC TCCCCAGGTGCCCCCCGGGGATTCAGGGCTGAATCTGCCCAGTTCCCACA CTCAGGCCAGCCCTCTTGGGAAGGTGGGTCCTCCATGGGGGTCCCTTCAG GAACTTTTTTTTTTTTTTTAATACAGAGTCTCACTCTGTCACCTAGGTTG GAGTGCAGTGGTGTGATGTCGGCTCACTGCAACCTCTGCCTCCCGGGTTC AAACGATTCTCCTGCCCCAGCCACTCTAGTAGCTGGAACTGCAGGTGTGC ACCACCACGCCGGGCTAGTTTTTGTATTTTAAGTAGAGACGGCATTTCAC CATATTGGTCAGGCTGGTCTCGAACTCCTGACCCCAAGTGTTCCGCCCGC CTCTGCCTCCCATAGTGCTAGAATTACAGGCCTGAGCTACTGCGCTTGGC CCCTTGCGGTACTTTTGGCCCAACCTCCTCCATGGCTGGGGACGCGGAGG CCGAGAGAGAAGTCACTTGCCCTGGCTCTACCTTGAAGTGGTTCTCAGGG TTGGGGCGAGAGTCGGGGTGGGGACCGAGATGCAGCTCTATCCTGTGCCC CTGGTCGCAGCAGGCAGCCCAGCGCTTCGCGTGTTCTACTTGGCCTGTCC GCTGCCGCCTAATGAGCTCAGGTCTAGGCCGAGCAGAGGGGGCACCTGGT CGGACTCGGTTGGGCTCGGGCGGCCCCGCCTCCCCCCGCCCGCCAGGCGG GCCCTTCTCGACGGCGCGGGGCGGGCCCTGCGGGCGCGGGGCTGAAGGCG GAACCACGACGGGCAGAGAGCACGGAGCCGGGAAGCCCCTGGGCGCCCGT CGGAGGGCTATGGAGCAGCGGCCGCGGGGCTGCGCGGCGGTGGCGGCGGT GAGTTGAGACGCAGGAGGCTAGGGGCAGCTTTGAGCCCTGTCCCAAGAGC CTCGGTGAAGGAAGGGGCCCCGGGCGCGTCTCCACTCCAAGCCTCACTGG GGGCTGGGTTGGCCGCCCTTTCCGATCTCGTTAAAGGCTCCTCCAGGGCG TAGCCCTTCCACTGAGAGGAAACCCCTCCCAGGAGGGTCTGGGGGCCCCA GGCAGAGCATTATCAGTGTCCCTCCCCCAACAGAAAGCATGGGTGGGGGT GGGGGCGCTGCTGGATTCCTGCTCTGGTGGAGGGGAAACTTGTGAGGGGC TGGTAAGCGCCCCCTCCGAAGCCTGGTGTGTGCGCGGGGGGAAGGAAGTT AGTTTCCTCTCCACCCATGGGCACCCCTTCTGCCCGGGGCCTGGGAAGTG GGCTGCTCTGTGGGCAAATGCTGGGGCCTCTGAAATGGAGGAGACGCAGC AGGGAGAGGCCCCACGTGGGCAGCTGCGCTGAGAGTCAGCAGCACCTGTC CCCCAGGCGCTCCTCCTGGTGCTGCTGGGGGCCCGGGCCCAGGGCGGCAC TCGTAGCCCCAGGTGTGACTGTGCCGGTGACTTCCACAAGAAGATTGGTC TGTTTTGTTGCAGAGGCTGCCCAGCGGGTAAGTGGCCACAGGGGTGGGAG AGGCATGGGGCAGGCAGGGCTGGAGAGGTGGCGGGCAGGCCCGGGAGGTA AGAGGAGGCTGGCAGGGGAGGTAGGGGTAGGCTGACAGAGAAGTAGGGAG CTGGAGAGAAAGAGGGAGGGAGGGCAGGGTGGGAAGCAGGTCGGGGGTTG CTGGGCAGCCCCTCTGCCTGCCTGACCCCTGCCTGGTTCCACAGGGCACT ACCTGAAGGCCCCTTGCACGGAGCCCTGCGGCAACTCCACCTGCCTTGTG TGTCCCCAAGACACCTTCTTGGCCTGGGAGAACCACCATAATTCTGAATG TGCCCGCTGCCAGGCCTGTGATGAGCAGGGTGAGGGGCTTCTCAGTGCTT GGCAGGGAGTTCCTAAGGACAGGCCTTTCTGAAGGAAGTGGCTGGCTCGG GCCCAAACTTGGGGTGTGAGGGTCCTGCACCCACCCTTGCCAGAACCCTC CACCCTGATCCTCCTTCAGGGTGCCCTTGCCCCTTCTCTCTTCCTGGTGA CCTTCCCATCTCTCCATGTGCCTTGGCCTCTGGTCGGCCTTAATCTCTGA GCTTCTCTCTTTTTTAGGGTAGCCCTGTACCTGTCTGTCTTTCGCCTATT TCTGTCTCCATTATCTTGGGATAATGCCTCTGCCTCTCCATGGGAGCCTT TGGCCCTGACTAACTCTCCACTCCCCATCTCCCTGCACCCCCACCAGCCT CCCAGGTGGCGCTGGAGAACTGTTCAGCAGTGGCCGACACCCGCTGTGGC TGTAAGCCAGGCTGGTTTGTGGAGTGCCAGGTCAGCCAATGTGTCAGCAG TTCACCCTTCTACTGCCAACCATGCCTAGACTGCGGGGCCCTGCACCGCC ACACACGGCTACTCTGTGAGTACCCCCACCCAGGGCTCTCTACTCCCAGA CCCCCTTCTCCCTGCCTGACCCACTCCTGTCCCATGGTGACGCATGCCTC TCCTGGATTGCAGGTTCCCGCAGAGATACTGACTGTGGGACCTGCCTGCC TGGCTTCTATGAACATGGCGATGGCTGCGTGTCCTGCCCCACGTAATTCC TAGCTGTCGTGGGATGGAGGGAAGGGCGGCTGGGAGCAGAGCAGGGGCCT GGGGTGGGGCAGGTGCTGCTGGTTCAGGAATAGGAAGAGGGGATAGGGAG GAGGGAGCCTTGGCCCTGTGATGGGTGGGCCCCACTTCAGGCAAACTTAG ATGGCAAAAGAGCAATCTGGATCCGCCTTAGCCAGATACATAAGGGTATT TGCCTTCACTTTCAGCCAGCATTCCCCCCAGCGATCCTAGCCAGATATTA CAGATGATTTGTCACTTACACAGAGAGTCACATTGATATAGCTTTAAAAC TTGGGCTGAAGGAGGTTGAGGCTGCAGTGAGCTATGATCGTGCCACTGCA CTTCAGCCTGGGCAACAGAGCGAGACCTATTAAATAAATAAATAAATATT AAATCTATTAAATATTAAATATTAAATCTATTAAATAAATAAATACAAAG GGCTGAGAGTCAGGACTGTGCTGCTAGTTCTCTAGGGGATCTTGGGCAAG TGCAGAGAATTCGCGTCTCTGATGTGTGGTGTCCCTTTCTCAACATGGGA TGTTAGCAGCTAATTCACAGGCCTTTGATCAGAGGTAAGGGACTTTCTGT AGCTATTCAAGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAG ACTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACT ACAACCTCTGCTGCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCAA GTAGCTGGGACTACAGGAGCCCACCACCACCCCCGGCTAATTTTTTGTAT TTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAAGATGGTCTTGATCAC CTGACCTCGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAG GCATGAGCCACCGCGCCCGGCCTCCATTCAAGTCTTTATTGAATATCTGC TATGTTCTACACACTGTTCTAGGTGCTGGGGATGCAACAGGGGACAAAAT AGGCAAAATCCCTGTCCTTTTGGGGTTGACATTCTAGTGACTCTTCATGT AGTCTAGAAGAAGCTCAGTGAATAGTGTCTGTGGTTGTTACCAGGGACAC AATGACAGGAACATTCTTGGGTAGAGTGAGAGGCCTGGGGAGGGAAGGGT CTCTAGGATGGAGCAGATGCTGGGCAGTCTTAGGGAGCCCCTCCTGGCAT GCACCCCCTCATCCCTCAGGCCACCCCCGTCCCTTGCAGGAGCACCCTGG GGAGCTGTCCAGAGCGCTGTGCCGCTGTCTGTGGCTGGAGGCAGAGTAGG TGGTGTGCTGGGAATGCGAGTGGGAGAACTGGGATGGACCGAGGGGAGGC GGGTGAGGAGGGGGGCAACCACCCAACACCCACCAGCTGCTTTCAGTGTT CTGGGTCCAGGTGCTCCTGGCTGGCCTTGTGGTCCCCCTCCTGCTTGGGG CCACCCTGACCTACACATACCGCCACTGCTGGCCTCACAAGCCCCTGGTT ACTGGTAAGTACACACACCCACACACGCACCCAGAAGCCTGGGGTCAGGA TGGGTAGCCCAGAGTCTACTCAACCCTGATACAGAAGGGGAAACTGAGGC AGGGAGTGTGGGGTGCAGAGGAACCCTAGAGGAGCTGTACCAGCACCCAG GTCCAGGAGGCTTGCCTGGTGGCTGACCGCAATCTCTCTGTGTCTGTCAG CAGATGAAGCTGGGATGGAGGCTCTGACCCCACCACCGGTAAGAACCTCA CTGTGTGATTCTGGGCTGCCTTCTGGAGCTGGAAGATCAAGCCTTACTAT GATCCCTGGAGCTTGGCACGCGGCCAGCACCGGGTAGCCCTAGTGGACAG AGGTGTTGGGAGCAGAGTCATCAGTGGATGAGACCAGCACAGTGCCTGCC CTCAAGGGGTGCTCAGTCAGCTGGAGTTCAGATTCGTACACAGGAGCTAA CAGTTCAATGGAAGGAGAGCCCCATGGTGCTGGGGGACAAGAGGAAGGAG GCGGGGGCAGGGGACTCAAGGCAGAAGCAAGAGTTCTGCTGGGCTACAGT GAGAGCAGGGCCAACTGTGGGAGGTGTCATTGCGGGGGTGTCTGCTGACT GAACCAGGGACTGTCCCCTCCTGGAGAGGCACTGCGGGTAAGGGGCCTTA CTTGGCAAGCAGGGCTGACCTGGGGCCCCTCTTGGCTTCCAGGCCACCCA TCTGTCACCCTTGGACAGCGCCCACACCCTTCTAGCACCTCCTGACAGCA GTGAGAAGATCTGCACCGTCCAGTTGGTGGGTAACAGCTGGACCCCTGGC TACCCCGAGACCCAGGAGGCGCTCTGCCCGCAGGTGACATGGTCCTGGGA CCAGTTGCCCAGCAGAGCTCTTGGTAAGGGACATCAGTGGCCTGAGGCCT TGACCCCATTCTCCTGTCTGCGGTGGGAAGTTGTGGTTTCACAACGTGTT CCCTTTCTGCCCCCTAACTGACGGAGTCCGCCCTATGCCCTGACCCACCG GATCCAGCGGGCTTCAGCCCTGGGGTACCCGCACGAACGCCCCTGACTCT GCCTCCCGACCGCGGCCCACGTACCCCAATTGGCTCTCTCTGGCCCTGCC CCAGGCCCCGCTGCTGCGCCCACACTCTCGCCAGAGTCCCCAGCCGGCTC GCCAGCCATGATGCTGCAGCCGGGCCCGCAGCTCTACGACGTGATGGACG CGGTCCCAGCGCGGCGCTGGAAGGAGTTCGTGCGCACGCTGGGGCTGCGC GAGGCAGAGATCGAAGCCGTGGAGGTGGAGATCGGCCGCTTCCGAGACCA GCAGTACGAGATGCTCAAGCGCTGGCGCCAGCAGCAGCCCGCGGGCCTCG GAGCCGTTTACGCGGCCCTGGAGCGCATGGGGCTGGACGGCTGCGTGGAA GACTTGCGCAGCCGCCTGCAGCGCGGCCCGTGACACGGCGCCCACTTGCC ACCTAGGCGCTCTGGTGGCCCTTGCAGAAGCCCTAAGTACGGTTACTTAT GCGTGTAGACATTTTATGTCACTTATTAAGCCGCTGGCACGGCCCTGCGT AGCAGCACCAGCCGGCCCCACCCCTGCTCGCCCCTATCGCTCCAGCCAAG GCGAAGAAGCACGAACGAATGTCGAGAGGGGGTGAAGACATTTCTCAACT TCTCGGCCGGAGTTTGGCTGAGATCGCGGTATTAAATCTGTGAAAGAAAA CAAAACAAAACAAAAACGGCTTCTTGGCGTTTCTGCGGGGCTGGGGTGTT AAGTGGACTGGACTTTTCTCGAGGGATTCGAAGGGGACGGGAATCTTGTC ACCCCGGGATCTGGCACCCATGGTGGAGTCCAGTGTGGCCTTAGCTCCCA AGCCTGCCCCTCCCGAGTCCACTCTGGCTCAATTACCCCGAGAAGGAGAG AGCAAGTCGCGGCCACAGCGAGTGAGTGAACCGGAGCCCAGATGAGAGCG CTTTAATGGGGCTGCGAGGTGGCGGAGACAGGGTCGGGATGGGGTGCAGC AGTTGGAGACACAGGGTCAGGGCCCCTCATCCTCTATTCACTCCACCGGG GCAGTGAAAGGGTCCCGGCAGCGAGTGGGTCTGGCTGGGGACGGGGCGCA GACTTGAGGGAGGTGGGGCCAGAGGTGGGGTCCCGGGGGCCACAAGTGCG GCCCGGCCAGACAGGCAGTTTTCATGTTTCTGGTAAACAAATGACTGAGA GGAAACCCTTGGCGGGGATAAGAAATGAGGCCCGGGCTAGGCCGCGCGCA GATCTGGGTCAGAGAGGAAGGGAAAACCCCTTCCCCGAGCTCGGGGCCTG CCTCCACCCAGGATGCGCCAGCGACGCCGGTTCCGGGGTGCGGGGGAGGG GGCTGCATCCTGGAGGGGGCTGAGCCCCGCAGGAAAACAAAGTCACCACC CACGGGGCTGGGGAGAGCTCTGCACTCTTTGATAGTCAACGAACATGCAA ATATATGTAAGTCGGCATGCAAATAAGCAGCATTTGTTG -- RickardSandberg - 14 May 2008
Topic revision: r1 - 2008-05-14 - RickardSandberg
